Nipoppy
An interface for the Nipoppy neuroimaging framework that enables AI agents to list files and manage clinical datasets. It facilitates interaction with neuroimaging data organized according to the Brain Imaging Data Structure (BIDS) standard.
What is Nipoppy?
Nipoppy is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to interface for the nipoppy neuroimaging framework that enables ai agents to list files and manage clinical datasets. it facilitates interaction with neuroimaging data organized according to the brain i...
An interface for the Nipoppy neuroimaging framework that enables AI agents to list files and manage clinical datasets. It facilitates interaction with neuroimaging data organized according to the Brain Imaging Data Structure (BIDS) standard.
This server falls under the Databases category on MCPgee, the world's largest MCP server directory with 33,000+ servers.
Features
- An interface for the Nipoppy neuroimaging framework that ena
Use Cases
Maintainer
Works with
Installation
Manual Installation
npx nipoppy-mcp-serverConfiguration
Configuration Details
claude_desktop_config.json
Performance
Response Metrics
Resource Usage
Frequently Asked Questions about Nipoppy
What is Nipoppy?
Nipoppy is a Model Context Protocol (MCP) server that interface for the nipoppy neuroimaging framework that enables ai agents to list files and manage clinical datasets. it facilitates interaction with neuroimaging data organized according to the brain imaging data structure (bids) standard. It connects AI assistants to external tools and data sources through a standardized interface.
How do I install Nipoppy?
Follow the installation instructions on the Nipoppy GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.
Which AI clients work with Nipoppy?
Nipoppy works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.
Is Nipoppy free to use?
Yes, Nipoppy is open source and available under the MIT License license. You can use it freely in both personal and commercial projects.
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Set Up Nipoppy in Your Editor
Choose your AI client for step-by-step setup instructions.
Quick Config Preview
Add this to your claude_desktop_config.json or .cursor/mcp.json
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