UCSC Genome Browser

v1.0.0Data Science & MLstable

Provides comprehensive access to the UCSC Genome Browser API, enabling queries of genomic data, DNA sequences, gene annotations, variants, and metadata across multiple species and assemblies.

ucsc-genome-browser-mcp-servermcpai-integration
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What is UCSC Genome Browser?

UCSC Genome Browser is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to provides comprehensive access to the ucsc genome browser api, enabling queries of genomic data, dna sequences, gene annotations, variants, and metadata across multiple species and assemblies.

Provides comprehensive access to the UCSC Genome Browser API, enabling queries of genomic data, DNA sequences, gene annotations, variants, and metadata across multiple species and assemblies.

This server falls under the Data Science & ML category on MCPgee, the world's largest MCP server directory with 33,000+ servers.

Features

  • Provides comprehensive access to the UCSC Genome Browser API

Use Cases

Query genomic data across species
DNA sequence and gene annotation lookup
hlydecker

Maintainer

LicenseMIT License
Languagetypescript
Versionv1.0.0
UpdatedN/A
Statushealthy
Maintenanceactive

Works with

ClaudeOpenAIwindowsmacoslinux

Installation

Manual Installation

npx ucsc-genome-browser-mcp-server

Configuration

Configuration Details

Config File

claude_desktop_config.json

Performance

Response Metrics

Response Time< 200ms
ThroughputMedium

Resource Usage

Memory UsageLow
CPU UsageLow

Frequently Asked Questions about UCSC Genome Browser

What is UCSC Genome Browser?

UCSC Genome Browser is a Model Context Protocol (MCP) server that provides comprehensive access to the ucsc genome browser api, enabling queries of genomic data, dna sequences, gene annotations, variants, and metadata across multiple species and assemblies. It connects AI assistants to external tools and data sources through a standardized interface.

How do I install UCSC Genome Browser?

Follow the installation instructions on the UCSC Genome Browser GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.

Which AI clients work with UCSC Genome Browser?

UCSC Genome Browser works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.

Is UCSC Genome Browser free to use?

Yes, UCSC Genome Browser is open source and available under the MIT License license. You can use it freely in both personal and commercial projects.

Browse More Data Science & ML MCP Servers

Explore all data science & ml servers available in the MCPgee directory. Each server includes setup guides for Claude, Cursor, and VS Code.

Quick Config Preview

{ "mcpServers": { "ucsc-genome-browser-mcp-server": { "command": "npx", "args": ["-y", "ucsc-genome-browser-mcp-server"] } } }

Add this to your claude_desktop_config.json or .cursor/mcp.json

Read the full setup guide →

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