OakVar
Enables AI assistants to perform genomic variant analysis using OakVar, including running annotation pipelines, managing 200+ annotator modules, querying variant databases, and generating reports in various formats.
What is OakVar?
OakVar is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to enables ai assistants to perform genomic variant analysis using oakvar, including running annotation pipelines, managing 200+ annotator modules, querying variant databases, and generating reports in v...
Enables AI assistants to perform genomic variant analysis using OakVar, including running annotation pipelines, managing 200+ annotator modules, querying variant databases, and generating reports in various formats.
This server falls under the Data Science & ML category on MCPgee, the world's largest MCP server directory with 33,000+ servers.
Features
- Enables AI assistants to perform genomic variant analysis us
Use Cases
Maintainer
Works with
Installation
Manual Installation
npx oakvar-mcp-serverConfiguration
Configuration Details
claude_desktop_config.json
Performance
Response Metrics
Resource Usage
Frequently Asked Questions about OakVar
What is OakVar?
OakVar is a Model Context Protocol (MCP) server that enables ai assistants to perform genomic variant analysis using oakvar, including running annotation pipelines, managing 200+ annotator modules, querying variant databases, and generating reports in various formats. It connects AI assistants to external tools and data sources through a standardized interface.
How do I install OakVar?
Follow the installation instructions on the OakVar GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.
Which AI clients work with OakVar?
OakVar works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.
Is OakVar free to use?
Yes, OakVar is open source and available under the MIT License license. You can use it freely in both personal and commercial projects.
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Set Up OakVar in Your Editor
Choose your AI client for step-by-step setup instructions.
Quick Config Preview
Add this to your claude_desktop_config.json or .cursor/mcp.json
Ready to use OakVar?
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