ESMfold
Enables protein sequence analysis and structure prediction by extracting ESM-2 embeddings and batch processing FASTA files via Docker. It provides tools for large-scale embedding extraction, job monitoring, and model management within an MCP-compatib
What is ESMfold?
ESMfold is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to enables protein sequence analysis and structure prediction by extracting esm-2 embeddings and batch processing fasta files via docker. it provides tools for large-scale embedding extraction, job monit...
Enables protein sequence analysis and structure prediction by extracting ESM-2 embeddings and batch processing FASTA files via Docker. It provides tools for large-scale embedding extraction, job monitoring, and model management within an MCP-compatib
This server falls under the Data Science & ML category on MCPgee, the world's largest MCP server directory with 33,000+ servers.
Features
- Enables protein sequence analysis and structure prediction b
Use Cases
Maintainer
Works with
Installation
Manual Installation
npx esmfold-mcp-serverConfiguration
Configuration Details
claude_desktop_config.json
Performance
Response Metrics
Resource Usage
Frequently Asked Questions about ESMfold
What is ESMfold?
ESMfold is a Model Context Protocol (MCP) server that enables protein sequence analysis and structure prediction by extracting esm-2 embeddings and batch processing fasta files via docker. it provides tools for large-scale embedding extraction, job monitoring, and model management within an mcp-compatib It connects AI assistants to external tools and data sources through a standardized interface.
How do I install ESMfold?
Follow the installation instructions on the ESMfold GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.
Which AI clients work with ESMfold?
ESMfold works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.
Is ESMfold free to use?
Yes, ESMfold is open source and available under the MIT license. You can use it freely in both personal and commercial projects.
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Set Up ESMfold in Your Editor
Choose your AI client for step-by-step setup instructions.
Quick Config Preview
Add this to your claude_desktop_config.json or .cursor/mcp.json
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