cBioPortal MCP
A server that enables AI assistants to interact with cancer genomics data from cBioPortal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information.
What is cBioPortal MCP?
cBioPortal MCP is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to server that enables ai assistants to interact with cancer genomics data from cbioportal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information....
A server that enables AI assistants to interact with cancer genomics data from cBioPortal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information.
This server falls under the Data Science & ML category on MCPgee, the world's largest MCP server directory with 33,000+ servers.
Features
- A server that enables AI assistants to interact with cancer
Use Cases
Maintainer
Works with
Installation
Manual Installation
npx cbioportal-mcp-serverConfiguration
Configuration Details
claude_desktop_config.json
Performance
Response Metrics
Resource Usage
Frequently Asked Questions about cBioPortal MCP
What is cBioPortal MCP?
cBioPortal MCP is a Model Context Protocol (MCP) server that server that enables ai assistants to interact with cancer genomics data from cbioportal, allowing users to explore cancer studies, access genomic data, and retrieve mutations and clinical information. It connects AI assistants to external tools and data sources through a standardized interface.
How do I install cBioPortal MCP?
Follow the installation instructions on the cBioPortal MCP GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.
Which AI clients work with cBioPortal MCP?
cBioPortal MCP works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.
Is cBioPortal MCP free to use?
Yes, cBioPortal MCP is open source and available under the MIT License license. You can use it freely in both personal and commercial projects.
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Set Up cBioPortal MCP in Your Editor
Choose your AI client for step-by-step setup instructions.
Quick Config Preview
Add this to your claude_desktop_config.json or .cursor/mcp.json
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