Bio-MCP FastQC
Enables AI assistants to perform quality control analysis on high-throughput sequencing data using FastQC and MultiQC. It supports single-file and batch processing of FASTQ/FASTA files and generates comprehensive, interactive summary reports.
What is Bio-MCP FastQC?
Bio-MCP FastQC is a Model Context Protocol (MCP) server that allows AI assistants like Claude, Cursor, and VS Code to enables ai assistants to perform quality control analysis on high-throughput sequencing data using fastqc and multiqc. it supports single-file and batch processing of fastq/fasta files and generates c...
Enables AI assistants to perform quality control analysis on high-throughput sequencing data using FastQC and MultiQC. It supports single-file and batch processing of FASTQ/FASTA files and generates comprehensive, interactive summary reports.
This server falls under the Data Science & ML category on MCPgee, the world's largest MCP server directory with 33,000+ servers.
Features
- Enables AI assistants to perform quality control analysis on
Use Cases
Maintainer
Works with
Installation
Manual Installation
npx bio-mcp-fastqc-serverConfiguration
Configuration Details
claude_desktop_config.json
Performance
Response Metrics
Resource Usage
Frequently Asked Questions about Bio-MCP FastQC
What is Bio-MCP FastQC?
Bio-MCP FastQC is a Model Context Protocol (MCP) server that enables ai assistants to perform quality control analysis on high-throughput sequencing data using fastqc and multiqc. it supports single-file and batch processing of fastq/fasta files and generates comprehensive, interactive summary reports. It connects AI assistants to external tools and data sources through a standardized interface.
How do I install Bio-MCP FastQC?
Follow the installation instructions on the Bio-MCP FastQC GitHub repository. Clone the repo, install dependencies, and add the server config to your AI client.
Which AI clients work with Bio-MCP FastQC?
Bio-MCP FastQC works with all major MCP-compatible AI clients including Claude Desktop, Claude Code, Cursor, VS Code (GitHub Copilot), Windsurf, and Cline.
Is Bio-MCP FastQC free to use?
Yes, Bio-MCP FastQC is open source and available under the MIT License license. You can use it freely in both personal and commercial projects.
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Set Up Bio-MCP FastQC in Your Editor
Choose your AI client for step-by-step setup instructions.
Quick Config Preview
Add this to your claude_desktop_config.json or .cursor/mcp.json
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